Expanding evolutionary neuroscience: insights from comparing variation in behavior

نویسندگان

چکیده

Neuroscientists have long studied species with convenient biological features to discover how behavior emerges from conserved molecular, neural, and circuit level processes. With the advent of new tools, viral vectors gene editing automated behavioral analyses, there has been a recent wave interest in developing new, “nontraditional” model species. Here, we advocate for complementary approach development, that is, clade as way integrate an evolutionary comparative neurobiological experiments. Capitalizing on natural variation investing experimental tools clades will be valuable strategy next generation neuroscience discovery. biologists shared animal (Darwin, 1897Darwin C. The Expression Emotions Man Animals. D. Appleton Company, 1897Google Scholar). For much histories their respective fields, however, they pursued this using different research strategies. On one hand, neuroscientists focused questions about molecular neural mechanisms controlled experiments single (i.e., “model” species) chosen or features. By contrast, diversification by comparing multiple share common ancestor clade) because vary behavior. These distinct approaches are own merits, but each also its limitations. While manipulative led fundamental discoveries behavior, limited ability test if those contribute between species, part due relatively infrequent application methods commonly used biologists. Conversely, comparisons provided insight into ultimate causes constraints diversity, it is often challenging hypotheses cellular underpinnings lack very modern research. complementarity these limitations suggests gained program integrates experimentation within quantitative (Figure 1). Such long-standing goal many neuroscientists, particular neuroethologists, who decades championed understanding both proximate (mechanistic) (evolutionary) But achieving requires taking two difficult steps. first develop differ second incorporate generate historical differences In just last few years, made hard-won progress toward steps, barriers falling (from traditional such pharmacology electrophysiological stimulation more optogenetics, vectors, CRISPR-Cas9 genome editing) spread Even task turning continues at increasingly rapid pace, studies explicitly remain rare. discuss interface biology promote integration. Specifically, argue choose study nontraditional systems, should consider not only make especially exciting groups (or clades) which belong phylogenetic exciting. We refer systems balance “model clades” (as contrast species”) suggest capitalize insights nervous system now unprecedented options when deciding underlying mechanisms. This therefore important time think carefully merits chosen. Using relationships help inform choices close integration approaches. Below, summarize motivations present particularly timely discovery, tradeoffs interests might face choosing study, outline well poised answer, some unique challenges implementing clade-based approach. Finally, describe three examples feedback serve inspiration. early history neuroscience, researchers started careers defining interested them then seeking out could most easily answered (Shepherd, 2010Shepherd G. Creating Modern Neuroscience: Revolutionary 1960s. Oxford University Press, 2010Google Scholar, Shepherd, 2016Shepherd Foundations Neuron Doctrine. 2016Google possible almost any question, organism whose conveniently even uniquely suited answering it, observation famously Danish physiologist August Krogh (Krogh, 1929Krogh A. Progress Physiology.Science. 1929; 70: 200-204Crossref PubMed Google Scholar) since referred Krogh’s principle, although was articulated 60 years earlier French Claude Bernard (Bernard, 1864Bernard Introduction à l’étude de la médecine expérimentale. Libraires L’Académie Impériale Médecine: J.B. Baillière et Fils, 1864Google discovery action potential squid axon (Hodgkin Huxley, 1945Hodgkin A.L. Huxley A.F. Resting potentials nerve fibres.J. Physiol. 1945; 104: 176-195Crossref Scopus (132) Scholar), learning memory sea slugs (Carew al., 1971Carew T.J. Castellucci V.F. Kandel E.R. An analysis dishabituation sensitization gill-withdrawal reflex Aplysia.Int. J. Neurosci. 1971; 2: 79-98Crossref (126) properties central pattern generators crustaceans (Dickinson 1990Dickinson P.S. Mecsas Marder E. Neuropeptide fusion motor-pattern generator circuits.Nature. 1990; 344: 155-158Crossref (120) oft-cited principle action. Despite famous examples, characterized tiny fraction diversity—the focus criticized myopic (Beach, 1950Beach F. Snark Was Boojum.Am. Psychol. 1950; 5: 115-124Crossref (0) Scholar; Katz, 2019Katz conservative bias life scientists.Curr. Biol. 2019; 29: R666-R667Abstract Full Text PDF extremely successful, focusing large number scientists small lab-friendly facilitated development set tools. Among powerful transgenic observing manipulating genetically defined cell types, thereby testing role specific neurons circuits while leaving others unaltered—a crucial studying patterns arise genes express. Together transgenics, additional manipulation (Desai 2017Desai N.S. Gray R. Johnston A dynamic clamp every rig.eNeuro. 2017; 4 (ENEURO.0250-0217.2017)Crossref (7) (Fenno 2020Fenno L.E. Ramakrishnan Kim Y.S. Evans K.E. Lo M. Vesuna S. Inoue Cheung K.Y.M. Yuen Pichamoorthy N. al.Comprehensive dual- triple-feature intersectional single-vector delivery diverse functional payloads cells behaving mammals.Neuron. 2020; 107: 836-853Abstract standardized psychophysical paradigms (Siemann 2015Siemann J.K. Muller C.L. Bamberger Allison J.D. Veenstra-VanderWeele Wallace M.T. novel paradigm assess multisensory processing mice.Front. Behav. 2015; 8: 456Crossref (20) combined descriptive resources like sequences, brain atlases, connectomes, come comprise what toolkit.” toolkit largely restricted transferrable allowing image models. As result, (once again) facing decision guide (Laurent, 2020Laurent value diversity neuroscience.Nat. Rev. 21: 395-396Crossref (3) Yartsev, 2017Yartsev M.M. emperor’s wardrobe: Rebalancing models research.Science. 358: 466-469Crossref (35) Some behaviors answer intractable “traditional” (e.g., basis vocal turn-taking duets singing mice; Banerjee 2019Banerjee Phelps S.M. Long M.A. Singing mice.Curr. R190-R191Abstract (4) Okobi 2019Okobi Jr., D.E. Matheson A.M.M. Motor cortical control interaction neotropical mice.Science. 363: 983-988Crossref (26) idiosyncratic, understudied may harbor function vision spiders, color changing cuttlefish, chemotactile touch octopus; Menda 2014Menda Shamble Nitzany E.I. Golden J.R. Hoy R.R. Visual perception jumping spider.Curr. 2014; 24: 2580-2585Abstract Reiter 2018Reiter Hülsdunk P. Woo T. Lauterbach Eberle J.S. Akay L.A. Longo Meier-Credo Kretschmer Langer al.Elucidating skin patterning cuttlefish.Nature. 2018; 562: 361-366Crossref (13) van Giesen 2020van L. Kilian P.B. Allard C.A.H. Bellono N.W. Molecular sensation Octopus.Cell. 183: 594-604Abstract Still enabled record whole-nervous-system activity freely moving cnidarian Hydra; Dupre Yuste, 2017Dupre Yuste Non-overlapping networks Hydra vulgaris.Curr. 27: 1085-1097Abstract (45) However, another reason diversifying research: compare traits (which behavioral) across foundation inferring evolution below, can lead principles 2016aKatz Evolution rhythmic behaviours.Philos. Trans. Soc. Lond. B Sci. 2016; 371: 20150057Crossref (67) Phylogenetic methods—statistical created inferences histories—have grown dramatically scope rigor Pennell Harmon, 2013Pennell M.W. Harmon L.J. integrative view methods: connections population genetics, community ecology, paleobiology.Ann. N Y Acad. 2013; 1289: 90-105Crossref (124) Smith 2020Smith S.D. Dunn C.W. Edwards S.V. Phylogenetics genetics (for biodiversity).Trends Ecol. Evol. 35: 415-425Abstract (6) Symonds Blomberg, 2014Symonds M.R.E. Blomberg S.P. primer generalised least squares.in: Garamszegi L.Z. Comparative Methods Their Application Evolutionary Biology. Springer, 2014: 105-130Crossref (175) successes other fields seen embracing (notably, developmental biology, “evo-devo”; Church Extavour, 2020Church S.H. Extavour C.G. Null evolution.Development. 147: dev178004Crossref rare neuroscience. One dearth comparison field, including emerging models, conserved. rightly motivated desire understand human (without directly performing humans). diverged over time, complement conservation basic principles. example, humans non-human primates identify genetic lineage responsible human-specific cognitive ability). More generally, had far longer than laboratory experiment “sample” solutions regulating contexts, permits address extent repertoires promoted constrained question Studying thus contributions offer our evolves shape repertoires. best differences? remains (see Gallant O’Connell, 2020Gallant O’Connell convergent relate genotype phenotype.J. Exp. 223: jeb213447Crossref Scholar notable exceptions), (Donoghue Edwards, 2019Donoghue M.J. E.J. Model vital ascertainment problem practice: response Beaulieu O’Meara (2018).Am. Bot. 106: 327-330Crossref ecology (Cavender-Bares, 2019Cavender-Bares Diversification, adaptation, assembly American oaks (Quercus), integrating evolution.New Phytol. 221: 669-692Crossref (41) and, increasingly, (Church Scholar): clades. Loosely defined, group all members related ancestor. Thus, populations individuals, subspecies, (most commonly) individuals grandparents genera reproductively isolated millions 2). Treating units opposed makes causes. promotes provide key mechanistic basis, evolution. system, no “perfect,” clade-centric applies effectively does individual species; benefit comparisons, probably question. term vague (Katz, 2016bKatz ‘Model organisms’ light evolution.Curr. 26: R649-R650Abstract Marder, 2020bMarder Words without meaning.eLife. 9: e54867Crossref (2) find useful draw parallel widely focal biology) addressing well-defined 3). guiding choice considerations: first, characteristics well-powered methods; second, feasible perform Two requirements well-established manner trait (be molecule) varies relative relationships. clade, power to, reconstruct ancestral states correlations (but, note work experiments). motivate search causes; allows polarize branch change occurred); addition behaviors) likely occurred ancestors present-day correlate environmental variables. seven deer mice methods, generalized least-squares, revealed nesting among closely effect body size climate (Lewarch Hoekstra, 2018Lewarch Hoekstra H.E. Peromyscus mice.Anim. 139: 103-115Crossref branches mean data distributed which, turn, means At extreme, Miles colleagues recently acoustic recordings drumming displays 134 woodpecker rhythm significantly features, specifically speed duration, display evolved (Miles 2020Miles M.C. Schuppe Fuxjager Selection trigger recursive elaborate woodpeckers.Am. Nat. 195: 772-787Crossref (1) How behavioral, respect feature impact comparisons. Clades same independently convergently) valuable, similar give rise repeatedly. produce electric six times distantly vertebrates (separated hundreds instances), organ derived skeletal muscle precursors transcription factors excitability (Gallant evidence vertebrate involving electrical discharge toolkit, potentially physical constrain available detail containing convergently behavior). reveal insights, collected, analyses be, increased sample sizes reconstructing chance finding Not equally controlled, usually (like size, cycle, ecology) rear lab numbers already contain either established (potentially transgenic) toolkits seed anchor them. previously classic Drosophila melanogaster developed (Stern 2017Stern D.L. Crocker Ding Y. Frankel Kappes Kuzmickas Lemire Mast Picard Genetic reagents simulans, mauritiana, yakuba, santomea, virilis.G3 (Bethesda). 7: 1339-1347Crossref (18) biologically need include however. Laupala genus forest dwelling Hawai’ian crickets mating songs rapidly diversified ?4 million resulting behaviorally still contains interfertile reared (Mendelson Shaw, 2005Mendelson Shaw K. Rapid speciation arthropod.Nature. 2005; 433: 375-376Crossref Xu 2019Xu K.L. song speciation: linking candidate isolation.Genetics. 211: 1089-1104Crossref (10) existence stable germline transgenics cricket Mediterranean field (Gryllus bimaculatus) (Kulkarni 2019Kulkarni Gryllus bimaculatus: techniques biology.in: Tworzydlo W. Bilinski Evo-Devo: Non-model Species Cell Developmental 2019: 183-216Crossref Nakamura 2010Nakamura Yoshizaki Ogawa Okamoto H. Shinmyo Bando Ohuchi Noji Mito Imaging embryos reveals movements consistent syncytial mechanism.Curr. 2010; 20: 1641-1647Abstract annotation kohalensis (Ylla 2020Ylla Itoh Kajitani Toyoda Tomonari Ishimaru Watanabe Fuketa al.Insights genomic insects genomes.bioRxiv. https://doi.org/10.1101/2020.07.07.191841Crossref steps above informative context strategy, always exist. taxa First, must maximize inferences. fewer require (often technically challenging) needed deeply mechanism variation, typically too powered methods. statistical robust increase comprehensively woodpeckers mentioned excellent discovering difficulty impossibility) tests >100 bird maintain lab. precise making confident alone. consideration separating interest. contexts use related, tradeoff less (though always) exhibit large, measured, heritable evolve comes challenges. numerous morphological prevent successful crosses importantly, confound differences. Perhaps are, becomes determine fact “same”; i.e., “apples

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ژورنال

عنوان ژورنال: Neuron

سال: 2021

ISSN: ['0896-6273', '1097-4199']

DOI: https://doi.org/10.1016/j.neuron.2021.02.002